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DeltaNet specifications

Information


Unique identifier OMICS_12367
Name DeltaNet
Software type Package/Module
Interface Command line interface
Restrictions to use None
Input data Gene expression profiles
Output data The output of DeltaNet comprises a ranked list of gene target predictions.
Operating system Unix/Linux, Mac OS, Windows
Programming languages MATLAB
License BSD 2-clause “Simplified” License
Computer skills Advanced
Stability Stable
Requirements
SpaSM, GLMNET
Maintained Yes

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Maintainer


  • person_outline Rudiyanto Guwan <>

Publication for DeltaNet

DeltaNet in publications

 (2)
PMCID: 5887474
PMID: 29325153
DOI: 10.1093/nar/gkx1314

[…] (). several notable methods include network identification by multiple regression (nir) (), mode of action by network identification (mni) (), sparse simultaneous equation model (ssem) () and deltanet (,). in these methods, the grn is inferred from a training dataset of gene expression profiles using a linear regression derived from a dynamic mechanistic model of the gene transcriptional […]

PMCID: 3809112
PMID: 23813274
DOI: 10.1099/jmm.0.055749-0

[…] the coastline of the kilia distributary delta (ukraine) and 165 km comprising the sulina section, the sfântu gheorghe distributary delta and the lagoon complex razim–sinoie (romanian territory) (deltanet; www.deltanet-project.eu/)., due to transiting several countries and industrialized urban centres (), the waters of the river are exposed to human activities and factories, which contribute […]


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DeltaNet institution(s)
Institute for Chemical and Bioengineering, Zurich, ETH Zurich, Switzerland; Swiss Institute of Bioinformatics, Lausanne, Switzerland
DeltaNet funding source(s)
This work has been supported by the ETH Zurich Research Grant.

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