DeMo specifications

Information


Unique identifier OMICS_23692
Name DeMo
Alternative names Deep Motif, DeMo Dashboard (Deep Motif Dashboard)
Software type Toolkit/Suite
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Computer skills Advanced
Stability Stable
Maintained Yes

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Maintainers


  • person_outline Jack Lanchantin <>
  • person_outline Ritambhara Singhrs <>
  • person_outline Zeming Linz <>
  • person_outline Yanjun Qi <>

Additional information


https://qdata.github.io/deep4biomed-web//Genome-DeepMotif/#demo

Publications for Deep Motif

DeMo in publication

PMCID: 2759523
PMID: 19876372
DOI: 10.1371/journal.pcbi.1000547

[…] the csk-related force peaks because we attributed the rapid force rises at the end of pulling just to stretching of the backbone without realizing existence of structure in some such rises., for a deep motif, the pattern may have several small force peaks before the final rise of the force, as observed for 2g4s and 1bj7. when the csk motif is very deep, it usually does not have any influence […]


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DeMo institution(s)
University of Virginia, Department of Computer Science, Charlottesville, VA, USA

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