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Denovo Solid Pipeline DSP

Optimizes the number of read-correction runs and computational resources via dynamic programming. Denovo Solid Pipeline is a semi-automated pipeline for short genome assembly using SOLiD sequencing data. This package has the advantage over the currently available pipeline of generating more contigs suitable for further assembly steps, increasing the chances of detecting sequencing errors and/or polymorphic sites.

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DSP classification

DSP specifications

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Command line interface
Biological technology:
Life Technologies
Apache License version 2.0

DSP distribution


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DSP support


  • Victor Flores <>



Center for Research and Advanced Studies National Polytechnic Institute Mexico City, Mexico

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