denovolyzeR specifications
Information
| Unique identifier | OMICS_16468 |
|---|---|
| Name | denovolyzeR |
| Software type | Package/Module |
| Interface | Command line interface |
| Restrictions to use | None |
| Operating system | Unix/Linux, Mac OS, Windows |
| Programming languages | R |
| License | GNU General Public License version 3.0 |
| Computer skills | Advanced |
| Version | 0.2.0 |
| Stability | Stable |
| Requirements |
rmarkdown, knitr, R(≥3.1.0), dplyr(≥0.3), reshape2(≥1.4)
|
| Source code URL | https://cran.r-project.org/src/contrib/denovolyzeR_0.2.0.tar.gz |
| Maintained | Yes |
Download
Versioning
No version available
Documentation
Maintainer
- person_outline James Ware
Publication for denovolyzeR
2015 Curr Protoc Hum Genet
PMCID: 4606471
PMID: 26439716
DOI: 10.1002/0471142905.hg0725s87
denovolyzeR citation
library_books
Mutations in HECW2 are associated with intellectual disability and epilepsy
2016
J Med Genet
PMCID: 5099177
PMID: 27334371
DOI: 10.1136/jmedgenet-2016-103814
[…] ntaining two or more variants with one inherited from each parent, and where no parent carried both variants, was identified. To calculate the probability of mutations in the HECW2 gene the R library denovolyzeR was used. […]
denovolyzeR funding source(s)
Supported by the NIHR Biomedical Research Unit in Cardiovascular Disease at Royal Brompton & Harefield NHS Foundation Trust and Imperial College London, Academy of Medical Sciences, Wellcome Trust, British Heart Foundation Arthritis Research U.K., Fondation Leducq, an HICF award from Wellcome Trust and Department of Health, the John S. LaDue Fellowship at Harvard Medical School, and grants R01MH089208 (NIH) and 1U01MH100229-01 (NIH/NIMH).
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