DepEst specifications
- Unique identifier:
- OMICS_15303
- Interface:
- Command line interface
- Input data:
- The gene expression dataset, the name of the estimator, the required arguments of the specified estimator.
- Programming languages:
- C++, R
- Version:
- 1.1
- Requirements:
- Parallel, foreach, snow, doSNOW, corpcor, Rtools
- Software type:
- Package/Module
- Restrictions to use:
- None
- Operating system:
- Unix/Linux, Mac OS, Windows
- Computer skills:
- Advanced
- Stability:
- Stable
- Maintained:
- Yes
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DepEst distribution
download
DepEst support
Maintainer
- Gökmen Altay <>
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Publications
-
(Altay, 2017)
DepEst: an R package of important dependency estimators for gene network inference algorithms.
BioRxiv.
DOI: 10.1101/102871
Institution(s)
La Jolla Institute for Allergy and Immunology, CA, USA; Computer Engineering, Yildiz Technical University, Istanbul, Turkey; Department Integrative Biology & Physiology, University of California Los Angeles, CA, USA
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