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Desharky | Automatic design of metabolic pathways for optimal cell growth

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A Monte Carlo algorithm that finds a metabolic pathway from a target compound by exploring a database of enzymatic reactions. DESHARKY outputs a biochemical route to the host metabolism together with its impact in the cellular context by using mathematical models of the cell resources and metabolism.

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Desharky forum

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Desharky classification

Desharky specifications

Unique identifier:
OMICS_04877
Interface:
Command line interface
Operating system:
Unix/Linux
Stability:
Stable
Software type:
Package/Module
Restrictions to use:
None
Computer skills:
Advanced
Maintained:
Yes

Desharky distribution

versioning

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No versioning.

Desharky support

Maintainer

  • Alfonso Jaramillo <>

Credits

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Publications

Institution(s)

Instituto de Biologia Molecular y Celular de Plantas, CSIC, Spain

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