deSPI specifications


Unique identifier OMICS_13253
Name deSPI
Software type Application/Script
Interface Command line interface
Restrictions to use None
Biological technology Illumina
Operating system Unix/Linux, Mac OS, Windows
Programming languages C, C++, Shell (Bash)
Computer skills Advanced
Stability Stable
Maintained Yes



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  • person_outline Yadong Wang <>

Publication for deSPI

deSPI in publications

PMCID: 5846640
PMID: 29581956
DOI: 10.15280/jlm.2018.8.1.16

[…] has also been found in smokers compared to non-smokers [,], as have higher structural damage to muscle fibres [,]. we did not see any clear effect of smoking in this group of healthy individuals despi te of the age span. it may be that it is due to the selection of a healthy group assessed on own judgement and clinical examination, thereby taking out any subjects who might have comorbidities […]

PMCID: 4671781
PMID: 26664106
DOI: 10.2147/COPD.S88702

[…] more comorbidities, and more vascular risk factors; and enterobacteriaceae are associated with younger patients in need of continuous positive airway pressure., elena güell farré (hospital sant joan despi moises broggi), enrique calderón sandubete (hospital universitario virgen del rocío), jordi guerrero gonzález (hospital general mateu orfila), rosa garcia contreras (hospital universitario […]

PMCID: 4445979
PMID: 26018556
DOI: 10.1186/s12955-015-0262-0

[…] university of toronto), ms a cymet (toronto western hospital), dr r. cervera md, phd, frcp (head, department of autoimmune diseases, hospital clínic barcelona), ms s. garcia-diaz (sant joan despi moises broggi hospital), dr. j.m pego reigosa (rheumatology department, university hospital of vigo), dr j. sibilia (centre national de référence des maladies autoimmunes systémiques rares), […]

PMCID: 4358332
PMID: 25798377
DOI: 10.5812/aapm.20337

[…] two groups with 50 individual in each using randlist software (datinf gmbh tübingen, germany). fifteen minutes before the end of operation, one gram of acetaminophen (combino pharm sl, sant joan despi, spain) was solved in 100 ml saline and administered within 15 minutes in patients of group a and a single intravenous injection of meperidine (caspian tamin, rasht, iran) 0.5 mg/kg […]

PMCID: 3654963
PMID: 23691013
DOI: 10.1371/journal.pone.0063296

[…] the culture medium used was rpmi-1640 media with 10% fbs (gibco, invitrogen, carlsbad, ca), 100 u/ml penicillin (normon sa, madrid, spain), 100 µg/ml streptomycin (laboratorio reig jofre, sant joan despi, spain), 2 mmol/l glutamine (sigma, st. louis, mo), 1 mmol/l sodium pyruvate (gibco), and 25 µmol/l β-mercaptoethanol (sigma). apoptosis was induced by uv irradiation (10 mj/m2) for 1 hour […]

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deSPI institution(s)
Center for Bioinformatics, Harbin Institute of Technology, Harbin, Heilongjiang, China
deSPI funding source(s)
Supported by the Nature Science Foundation of China (Nos: 61301204 and 31301089), the High-Tech Research and Development Program (863) of China (Nos: 2015AA020101, 2015AA020108 and 2014AA021505).

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