DeTCT statistics

info info

Citations per year


Popular tool citations

chevron_left Known transcript quantification chevron_right

Tool usage distribution map

Tool usage distribution map
info info

Associated diseases

Associated diseases
Want to access the full stats & trends on this tool?

DeTCT specifications


Unique identifier OMICS_09576
Name DeTCT
Alternative name Differential expression Transcript Counting Technique
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Computer skills Advanced
Stability Stable
Maintained Yes


No version available



  • person_outline Elisabeth M. Busch-Nentwich

Publication for Differential expression Transcript Counting Technique

DeTCT citations


A high resolution mRNA expression time course of embryonic development in zebrafish

PMCID: 5690287
PMID: 29144233
DOI: 10.7554/eLife.30860.051

[…] ()., using poly(a) pulldown rna-seq we have generated a comprehensive polyadenylated rna expression profile of normal zebrafish development. we have also used a 3′ end enrichment method called detct, developed by us for cost-effective high-throughput polya transcript screening (), to catalogue 3’ end usage. we have taken advantage of the large numbers of offspring and have divided the 5 […]


Proteolytic activity assayed by subcellular localization switching of a substrate

PMCID: 5613695
PMID: 28955937
DOI: 10.1016/j.bbrep.2016.07.011

[…] previously . briefly, cells were fixed in 4% formaldehyde on ice for 5 min and then treated with methanol at 20 °c overnight. monoclonal antibody (mab) 9e10 against the myc-epitope was used to detct myc-tagged vp24 . the secondary antibody used for immunofluorescence was fluorescein isothiocyanate (fitc) labelled anti-mouse igg1. the cells were examined with confocal laser scanning […]


The Lymphatic Endothelial mCLCA1 Antibody Induces Proliferation and Growth of Lymph Node Lymphatic Sinuses

PLoS One
PMCID: 4880189
PMID: 27224029
DOI: 10.1371/journal.pone.0156079

[…] popliteal ln sections were stained for lyve-1 and cd11b expression. cd11b+ macrophages coated the lyve-1+ lymphatic sinuses in both hamster igg- and 10.1.1 ab-injected mice. we were unable to detct any increase in macrophage representation or distribution on the growing sinuses in lns from 10.1.1 ab-treated mice (). moreover, the staining of cd11b+ macrophages (, arrows) and lyve-1+ lecs […]

Want to access the full list of citations?
DeTCT institution(s)
Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridgeshire, UK
DeTCT funding source(s)
The Wellcome Trust Sanger Institute (grant number WT098051), the EU Sixth Framework Programme (ZF-MODELS, contact number LSHG-CT-2003-503496); the EU Seventh Framework Programme (ZF-HEALTH)

DeTCT reviews

star_border star_border star_border star_border star_border
star star star star star

Be the first to review DeTCT