Dataset features

Specifications


Application: RNA-seq analysis
Number of samples: 6
Release date: Oct 31 2018
Last update date: Nov 30 2018
Access: Public
Diseases: Congenital Abnormalities, Nasal Septal Perforation
Genes: PTF1A, Icst
Taxon: Homo sapiens, Mus musculus
Dataset link Genome-wide chromatin accessibility and transcriptome profiling shows that minimal epigenome changes lead to coordinated transcriptional dysregulation of hedgehog signaling in Danforth’s short tail mice (RNA-seq)

Experimental Protocol


RNA-seq was performed on DNA isolated from the tailbuds of E9.5 WT and homozygous Danforth mutant mice (n = 3 per group). Tailbuds from 2 mice were pooled when necessary to ensure sufficient input material.

Repositories


GEO

GSE108803

ENA

SRP128168

BioProject

PRJNA428787

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