DIADEM specifications


Unique identifier OMICS_14243
Alternative name DIgital reconstruction of Axonal and DEndritic Morphology
Restrictions to use None
Community driven Yes
Data access File download, Browse
User data submission Not allowed
Maintained Yes



  • person_outline Giorgio Ascoli

Publications for DIgital reconstruction of Axonal and DEndritic Morphology

DIADEM citation


A Manual Segmentation Tool for Three Dimensional Neuron Datasets

Front Neuroinform
PMCID: 5450622
PMID: 28620293
DOI: 10.3389/fninf.2017.00036

[…] l computational algorithms and tools to segment neural structures, such as soma and neurites, are still lacking (Meijering, ), despite the organization of competitions in the field [e.g., the DIADEM (Digital Reconstruction of Axonal and Dendritic Morphology) challenge (Ascoli, )]. In fact, different tools for the extraction of 3D neural structures have been presented in the literature (Kass et al. […]

DIADEM institution(s)
Krasnow Institute for Advanced Study, George Mason University, Fairfax, VA, USA; Department of Neuroscience, University of Pittsburgh, Pittsburgh, PA, USA; MRC Clinical Sciences Centre, Imperial College London, London, UK; Department of Biological Sciences, University of Southern California, Los Angeles, CA, USA; Division of Neurobiology, MRC Laboratory of Molecular Biology, Cambridge, UK; Department of Biological Sciences, James H. Clark Center for Biomedical Engineering and Sciences, Stanford University, Stanford, CA, USA; Department of Physiology, Tokyo Medical and Dental University School of Medicine, Tokyo, Japan
DIADEM funding source(s)
This work was supported in part by NIH R01 grant 39600.

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