DIALIGN-TX protocols

DIALIGN-TX specifications

Information


Unique identifier OMICS_24606
Name DIALIGN-TX
Alternative name DIALIGN-T
Interface Web user interface
Restrictions to use None
Input data A file containing protein sequences or a file containing DNA sequences.
Input format Multiple FASTA
Computer skills Basic
Stability Stable
Maintained Yes
Wikipedia https://en.wikipedia.org/wiki/DIALIGN-TX

Maintainers


  • person_outline Burkhard Morgenstern <>
  • person_outline Amarendran Subramanian <>

Information


Unique identifier OMICS_24606
Name DIALIGN-TX
Alternative name DIALIGN-T
Software type Application/Script
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
License GNU Lesser General Public License version 3.0
Computer skills Advanced
Version 1.0.2
Stability Stable
Maintained Yes
Wikipedia https://en.wikipedia.org/wiki/DIALIGN-TX

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Maintainers


  • person_outline Burkhard Morgenstern <>
  • person_outline Amarendran Subramanian <>

Publications for DIALIGN-TX

DIALIGN-TX IN pipeline

2016
PMCID: 5057483
PMID: 27777508
DOI: 10.1186/s41182-016-0032-7

[…] the primers designed from the sequence previously reported [17]., phylogenetic analyses of the vp region of selected tick-borne orbivirus proteins and amino acid sequences were aligned using the dialign-tx v1.0.2 and trimal v1.2 [19–21]. the substitution models were determined by prottest v3.4.1 while the phylogenetic trees were reconstructed by the maximum likelihood model using phyml […]

DIALIGN-TX institution(s)
Wilhelm-Schickard-Institut fur Informatik, University of Tubingen, Tubingen, Germany; Institute of Microbiology and Genetics, University of Gottingen, Gottingen, Germany; Department of Mathematics, Indian Institute of Technology, Kharagpur, India
DIALIGN-TX funding source(s)
Supported by Deutsche Forschungsgemeinschaft (grants MO 1048/1-1 and MO 1048/6-1, in part).

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