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Citations per year

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Protocols

DiaTrack specifications

Information


Unique identifier OMICS_06587
Name DiaTrack
Software type Toolkit/Suite
Interface Graphical user interface
Restrictions to use None
Operating system Windows
Computer skills Medium
Stability Stable
Maintained Yes

Versioning


No version available

DiaTrack citations

 (41)
library_books

A mobile endocytic network connects clathrin independent receptor endocytosis to recycling and promotes T cell activation

2018
Nat Commun
PMCID: 5913236
PMID: 29686427
DOI: 10.1038/s41467-018-04088-w

[…] s NFAT and TSAd was determined by using ImageJ/Fiji Plugin TANGO and its included Nuclear Edge Detector for nuclear segmentation and determining integrated intensity density.Vesicle tracking: we used DiaTrack 3.04 PRO[Vallotton et al Tritrack]. At first, we filtered the image with a Gaussian filter to obtain one kernel per vesicle. Secondly, we manually selected the region covering the inside of t […]

library_books

Skeletal myosin binding protein C isoforms regulate thin filament activity in a Ca2+ dependent manner

2018
Sci Rep
PMCID: 5805719
PMID: 29422607
DOI: 10.1038/s41598-018-21053-1

[…] without pixel binning (95 nm/pixel) and down-sampled to 2 frames/s using ImageJ 1.43 u (NIH). We analyzed the images for velocity of individual NTFs and percentage of mobile NTFs in each movie using DiaTrack 3.03 software (Semasopht). Data were collected as the velocity of moving and percentage of moving filaments from individual movies (Supplemental Figure ). Data are presented as mean velocity  […]

library_books

Long term preservation of planar cell polarity in reversed tracheal epithelium

2018
PMCID: 5797350
PMID: 29394896
DOI: 10.1186/s12931-018-0726-y

[…] us, Tokyo, Japan) and recorded at 50 frames/s, using a high-speed camera (FASTCAM mini UX50; Photron, Tokyo, Japan). The directions of microsphere movements were measured between sequential frames by DIAtrack software (downloaded from http://www.diatrack.org/). To monitor ciliary movement, tracheal samples were reacted with 4 μg/mL fluorescein isothiocyanate-conjugated wheat germ agglutinin (FITC- […]

library_books

Three mammalian tropomyosin isoforms have different regulatory effects on nonmuscle myosin 2B and filamentous β actin in vitro

2017
PMCID: 5777259
PMID: 29191834
DOI: 10.1074/jbc.M117.806521

[…] tin sliding motility was measured at 30 °C as described previously (). HMM was directly bound to the nitrocellulose-coated surface. Actin filament velocity was determined with the help of the program DiaTrack 3.01 (Semasopht, Switzerland). Data analysis was performed with Origin 9.0G (OriginLab). Goodness-of-fit criteria were evaluated using the coefficient of determination R2 and χ2 tests as impl […]

call_split

Analysis and correction of errors in nanoscale particle tracking using the Single pixel interior filling function (SPIFF) algorithm

2017
Sci Rep
PMCID: 5707392
PMID: 29185459
DOI: 10.1038/s41598-017-14166-6
call_split See protocol

[…] s they traveled along flow-extended double-stranded DNA under several flow conditions. The MSD values reported in the paper were obtained from tracking video data using the Gaussian fitting method in DiaTrack 3.0  software suite.We re-analyzed the reported particle trajectories and found pixel-locking in the trajectory data (Fig. ). Surprisingly, the SPIFF correction did not improve the results. W […]

library_books

T Time: A data repository of T cell and calcium release activated calcium channel activation imagery

2017
BMC Res Notes
PMCID: 5557281
PMID: 28807036
DOI: 10.1186/s13104-017-2739-x

[…] aging techniques, there has been an increased effort placed on creating computational methods to analyze this massive amount of data [, ], with solutions being offered by companies such as http://www.diatrack.org/ used in [] or Imaris software used in []. However, there have been very few processed results released to the public for the purpose of independent evaluation the effectiveness of differ […]


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