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Dicer cleavage site detection software tools | RNA interference

Dicer, an RNase III enzyme, plays a vital role in the processing of pre-miRNAs for generating the miRNAs. The structural and sequence features on pre-miRNA which can facilitate position and efficiency of cleavage are not well known. A precise…
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LBSizeCleav
Desktop

LBSizeCleav

A method for predicting Dicer cleavage sites. LBSizeCleav offers a feature…

A method for predicting Dicer cleavage sites. LBSizeCleav offers a feature space mapping by introducing the length of a loop/bulge structure into the algorithm. The binary pattern of LBSizeCleav is…

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PHDcleav
Web

PHDcleav

A webserver to predict Dicer cleavage sites in pre-miRNA. PHDcleav can be used…

A webserver to predict Dicer cleavage sites in pre-miRNA. PHDcleav can be used to investigate functional consequences of genetic variations/SNPs in miRNA on Dicer cleavage site, and gene silencing.…

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Microprocessor…
Web

Microprocessor SVM

Predicts 5' Drosha processing sites in hairpins that are candidate miRNAs.…

Predicts 5' Drosha processing sites in hairpins that are candidate miRNAs. Microprocessor SVM correctly predicts the processing site for 50% of known human 5' miRNAs, and 90% of its…

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