DICEseq specifications

Information


Unique identifier OMICS_12338
Name DICEseq
Alternative name Dynamic Isoform spliCing Estimator via sequencing data
Software type Package/Module
Interface Command line interface
Restrictions to use None
Input data Some single-end and paired-end reads.
Operating system Unix/Linux
Programming languages Python
License Apache License version 2.0
Computer skills Advanced
Version 0.2.4
Stability Stable
Requirements numpy, matplotlib, pysam
Maintained Yes

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Documentation


Maintainer


  • person_outline G. Sanguinetti <>

Additional information


http://diceseq.sourceforge.net/manual.html http://diceseq.sourceforge.net/install.html https://sourceforge.net/projects/diceseq/?SetFreedomCookie

Publication for Dynamic Isoform spliCing Estimator via sequencing data

DICEseq institution(s)
School of Informatics, University of Edinburgh, Edinburgh, UK; Centre for Synthetic and Systems Biology (SynthSys), University of Edinburgh, Edinburgh, UK
DICEseq funding source(s)
Supported by the European Research Council under grant MLCS306999; the University of Edinburgh through a Principal Career Development scholarship.

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