DICHOT statistics

info info

Citations per year

info

Tool usage distribution map

info info

Associated diseases

info

Popular tool citations

chevron_left Disorder databases chevron_right
Want to access the full stats & trends on this tool?

Protocols

DICHOT specifications

Information


Unique identifier OMICS_06240
Name DICHOT
Restrictions to use None
Maintained No

Publication for DICHOT

DICHOT citations

 (5)
call_split

Large scale aggregation analysis of eukaryotic proteins reveals an involvement of intrinsically disordered regions in protein folding

2018
Sci Rep
PMCID: 5766493
PMID: 29330519
DOI: 10.1038/s41598-017-18977-5
call_split See protocol

[…] cted aggregation propensity was calculated by TANGO 2.3, whose binary program was obtained from the website (http://tango.crg.es/). The prediction of intrinsically disordered regions was performed by DICHOT algorithm,. Essentiality of each gene was obtained from the report by Giaever et al.. Protein abundance in the cell was obtained from the report by Huh et al.. The enrichment analysis based on […]

library_books

Amyotrophic Lateral Sclerosis Type 20 In Silico Analysis and Molecular Dynamics Simulation of hnRNPA1

2016
PLoS One
PMCID: 4945010
PMID: 27414033
DOI: 10.1371/journal.pone.0158939

[…] eled structure, its secondary structure was predicted by PsiPred [], JuFo9D [] and Jpred [], and six disorder prediction algorithms were also consulted: FoldIndex [], Disopred [], ELM [], DisEMBL [], DICHOT [] and D2P2 []. […]

library_books

Multiple Localization and Hub Proteins

2016
PLoS One
PMCID: 4902230
PMID: 27285823
DOI: 10.1371/journal.pone.0156455

[…] We analyzed the structures of NCP, CMP and NCMP, in terms of their intrinsic disorder and domain architectures. The results were compared with those from NP, CP and MP. The IDRs were predicted by DICHOT []. The P-fam domains [] were assigned by HMMER []. The distributions of the protein length, the percentage of IDR, and the longest IDR length are shown in , along with the average percentage o […]

library_books

A Method for Systematic Assessment of Intrinsically Disordered Protein Regions by NMR

2015
Int J Mol Sci
PMCID: 4519922
PMID: 26184172
DOI: 10.3390/ijms160715743

[…] ion methods based on amino acid sequence analysis have succeeded [,,,]. Examples of the prediction tools in this category include DisEMBLE [], GlobProt [], PONDR, DISOPRED [], DISpro [], VSL2 [], and DICHOT []. We have also developed a series of web applications named POODLE [,,]. In designing the POODLE suite, we implemented three different programs (POODLE-S, POODLE-L, and POODLE-W) according to […]

library_books

Development of an accurate classification system of proteins into structured and unstructured regions that uncovers novel structural domains: its application to human transcription factors

2009
BMC Struct Biol
PMCID: 2687452
PMID: 19402914
DOI: 10.1186/1472-6807-9-26

[…] The DICHOT system was constructed by combining three methods of structural domain identification, disorder prediction by DISOPRED2, and classification by the CLADIST program. Figure shows a flow chart of […]


Want to access the full list of citations?
DICHOT institution(s)
Center for Information Biology and DNA Data Bank of Japan; National Institute of Genetics, Yata, Mishima, Shizuoka, Japan

DICHOT reviews

star_border star_border star_border star_border star_border
star star star star star

Be the first to review DICHOT