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Diffeomorphic Demons specifications


Unique identifier OMICS_20643
Name Diffeomorphic Demons
Alternative name demons
Software type Framework/Library
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Computer skills Advanced
Stability Stable
Source code URL https://www.insight-journal.org/download/sourcecode/154/12
Maintained Yes




No version available

Publication for Diffeomorphic Demons

Diffeomorphic Demons citations


Inter patient image registration algorithms to disentangle regional dose bioeffects

Sci Rep
PMCID: 5861107
PMID: 29559687
DOI: 10.1038/s41598-018-23327-0

[…] or which an open-source implementation is available: the log diffeomorphic extension of the Demons registration and the B-spline Elastix registration. Both approaches are known to have pros and cons. Diffeomorphic Demons ensure the invertibility of the deformation fields and allow following complex warps thanks to the high number of degrees of freedom; conversely, the same high number of degrees o […]


Nonrigid registration with corresponding points constraint for automatic segmentation of cardiac DSCT images

Biomed Eng Online
PMCID: 5370472
PMID: 28351368
DOI: 10.1186/s12938-017-0323-1

[…] ith adaptive control point status were applied to registration procedure. Peyrat et al. [] presented a framework for the nonlinear spatiotemporal registration of 4D time-series of images based on the Diffeomorphic Demons algorithm. The authors declared that registration should be consistent over time as opposed to 3D registration which solely aims at mapping homologous points at a given time-point […]


Nonlinear image registration with bidirectional metric and reciprocal regularization

PLoS One
PMCID: 5322897
PMID: 28231342
DOI: 10.1371/journal.pone.0172432

[…] he other hand, some effective numerical methods for these registration models were developed. Vercauteren and his coauthors combined the Demons algorithm with the diffeomorphic framework and proposed Diffeomorphic Demons algorithm [], while they added the high-order information to their model by using the high-order BCH formulae []. A comparison of LDDMM and Diffeomorphic Demons can be found in [] […]


Pieces of parts for supervoxel segmentation with global context: Application to DCE MRI tumour delineation☆

Med Image Anal
PMCID: 4917895
PMID: 27054278
DOI: 10.1016/j.media.2016.03.002

[…] e temporal resolution for some scans, linear interpolation was used to resample these scans to 12 s intervals.Motion correction: We use an existing non-rigid image registration framework based on the Diffeomorphic Demons modified with Normalized Gradient Fields (NGF) (, ); details of the current implementation can be found in . The NGF is the contrast-invariant representation, which is used during […]


Patient specific coronary blood supply territories for quantitative perfusion analysis

PMCID: 5774224
PMID: 29392098
DOI: 10.1080/21681163.2016.1192003

[…] tration instances listed in this section.Another example of consecutive frame-to-frame registration is provided in the work Peyrat et al. (). The authors propose the use of the physically constrained diffeomorphic Demons algorithm for calculation of a phase-to-phase VDFs which are used for the estimation of myocardium strain. The key relevance of this work in the context of the registration method […]


Spatio Temporal Regularization for Longitudinal Registration to Subject Specific 3d Template

PLoS One
PMCID: 4547713
PMID: 26301716
DOI: 10.1371/journal.pone.0133352

[…] an be subject to bias in particular due to non-linear registration when an arbitrary reference image is chosen [] or due to interpolation asymmetry []. 4D Hammer [] or non-linear registration such as Diffeomorphic Demons [, ] and ANTs [] require a reference image to be defined, therefore introducing possible bias. Symmetric interpolation and registration might not be sufficient to correct for bias […]

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Diffeomorphic Demons institution(s)
Asclepios Research Group, INRIA Sophia-Antipolis, France; Mauna Kea Technologies, Paris, France

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