Diffany specifications

Unique identifier:
OMICS_10976
Software type:
Application/Script
Restrictions to use:
None
Operating system:
Unix/Linux, Mac OS, Windows
Computer skills:
Medium
Requirements:
Cytoscape
Name:
Differential network analysis tool
Interface:
Graphical user interface
Input data:
The input set always contains one reference network which represents the interactome of an untreated/unperturbed organism, while all other networks are condition-specific, each modelling the interactome of the same organism subjected to a specific environmental condition or stimulus.
Programming languages:
Java
Stability:
Stable

versioning

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No versioning.

Diffany specifications

Unique identifier:
OMICS_10976
Software type:
Framework/Library
Restrictions to use:
None
Operating system:
Unix/Linux, Mac OS, Windows
Computer skills:
Advanced
Requirements:
Cytoscape
Name:
Differential network analysis tool
Interface:
Command line interface
Input data:
The input set always contains one reference network which represents the interactome of an untreated/unperturbed organism, while all other networks are condition-specific, each modelling the interactome of the same organism subjected to a specific environmental condition or stimulus.
Programming languages:
Java
Stability:
Stable
Maintained:
Yes

versioning

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No versioning.

Diffany distribution

download

Diffany support

Documentation

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Credits

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Publications

Institution(s)

Department of Plant Systems Biology, VIB, Technologiepark, Ghent, Belgium; Department of Plant Biotechnology and Bioinformatics, Ghent University, Technologiepark, Ghent, Belgium; Genomics Research Institute, University of Pretoria, Pretoria, South Africa

Funding source(s)

This work was supported by Ghent University (Multidisciplinary Research Partnership Bioinformatics: from nucleotides to networks), the Research Foundation Flanders (FWO), and the Interuniversity Attraction Poles Program (grant no. P7/29 ‘MARS’) initiated by the Belgian Science Policy Office, by Ghent University (Bijzonder Onderzoeksfonds Methusalem project no. BOF08/01M00408, Multidisciplinary Research Partnership Biotechnology for a Sustainable Economy project no. 01MRB510W).

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