DPT specifications

Unique identifier:
OMICS_18053
Software type:
Package/Module
Restrictions to use:
None
Programming languages:
Python, R
Version:
0.6.0
Source code URL:
https://www.helmholtz-muenchen.de/fileadmin/ICB/software/dpt_0.6.0.tar.gz
Name:
Diffusion PseudoTime
Interface:
Command line interface
Operating system:
Unix/Linux
Computer skills:
Advanced
Stability:
Stable
Maintained:
Yes

versioning

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No versioning.

DPT support

Maintainer

  • Fabian Theis <>

Additional information

A Matlab version is also available, but is out of date and does not contain recent updates.

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Credits

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Publications

Institution(s)

Helmholtz Zentrum München, German Research Center for Environmental Health, Institute of Computational Biology, Neuherberg, Germany; Department of Mathematics, Technische Universität München, Munich, Germany; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, UK.

Funding source(s)

Supported by a DFG Fellowship through the Graduate School of Quantitative Biosciences Munich (QBM), the “Helmholtz Postdoc Programme”, Initiative and Networking Fund of the Helmholtz Association, the UK Medical Research Council (MRC) via a Career Development Award (Biostatistics), the German Science Foundation (SFB 1243 and Graduate School QBM) and the Bavarian government (BioSysNet).

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