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Protocols

Dinosolve specifications

Information


Unique identifier OMICS_04215
Name Dinosolve
Interface Web user interface
Restrictions to use None
Computer skills Basic
Stability No
Maintained Yes

Publication for Dinosolve

Dinosolve citations

 (2)
call_split

Soft Computing Methods for Disulfide Connectivity Prediction

2015
Evol Bioinform Online
PMCID: 4620934
PMID: 26523116
DOI: 10.4137/EBO.S25349
call_split See protocol

[…] d windows of 15 residues. They calculate the mean-force potentials as statistics to estimate the favorability of cysteine contacts. The cysteine bonding state is also predicted by this method, called Dinosolve.Martelli et al. present a hybrid system based on hidden neural networks that combine ANNs and hidden Markov models for the prediction of bonding states. A window of 27 residues centered on t […]

library_books

Reversible Oxidation of a Conserved Methionine in the Nuclear Export Sequence Determines Subcellular Distribution and Activity of the Fungal Nitrate Regulator NirA

2015
PLoS Genet
PMCID: 4488483
PMID: 26132230
DOI: 10.1371/journal.pgen.1005297

[…] http://clavius.bc.edu/~clotelab/DiANNA/) with the NirA sequence omitting the cysteines in the DBD (query sequence residues 71 to 892) predicts four disulfide bonds whereas the same query submitted to DINOSOLVE (http://hpcr.cs.odu.edu/dinosolve/) predicts five disulfide bonds but also in this prediction, the cysteines potentially involved in disulfide formation partially overlap with the residues p […]


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