Main logo
?
tutorial arrow
×
Create your own tool library
Bookmark tools and put favorites into folders to find them easily.

DiProGB | The dinucleotide properties genome browser

Online

An easy to use new genome browser that encodes the primary nucleotide sequence by thermodynamical and geometrical dinucleotide properties. The nucleotide sequence is thus converted into a sequence graph. This visualization, supported by different graph manipulation options, facilitates genome analyses, because the human brain can process visual information better than textual information. Also, DiProGB can identify genomic regions where certain physical properties are more conserved than the nucleotide sequence itself. Most of the DiProGB tools can be applied to both, the primary nucleotide sequence and the sequence graph.

User report

tutorial arrow
×
Vote up tools and offer feedback
Give value to tools and make your expertise visible
Give your feedback on this tool
Sign up for free to join and share with the community

0 user reviews

star_border star_border star_border star_border star_border
star star star star star

0 user reviews

star_border star_border star_border star_border star_border
star star star star star

No review has been posted.

DiProGB forum

tutorial arrow
×
Communicate with other users
Participate in the forum to get support for using tools. Ask questions about technical specifications.
Take part in the discussion
Sign up for free to ask question and share your advices

No open topic.

DiProGB classification

DiProGB specifications

Unique identifier:
OMICS_00880
Software type:
Package/Module
Restrictions to use:
None
Operating system:
Mac OS, Windows
Computer skills:
Medium
Maintained:
Yes
Name:
Dinucleotide Properties Genome Browser
Interface:
Graphical user interface
Input format:
GenBank, FASTA, text or multiple FASTA/text files
Programming languages:
C++
Stability:
Stable

DiProGB distribution

versioning

tutorial arrow
×
Upload and version your source code
Get a DOI for each update to improve tool traceability. Archive your releases so the community can easily visualize progress on your work.
Facilitate your tool traceability
Sign up for free to upload your code and get a DOI

No versioning.

DiProGB support

Maintainer

  • Maik Friedel <>

Credits

tutorial arrow
×
Promote your skills
Define all the tasks you managed and assign your profile the appropriate badges. Become an active member.
Promote your work
Sign up for free to badge your contributorship

Publications

Institution(s)

Biocomputing Group, Leibniz Institute for Age Research – Fritz Lipmann Institute, Jena Centre for Bioinformatics; Systems Biology/Bioinformatics Group, Leibniz Institute for Natural Product Research and Infection Biology – Hans Knöll Institute, Jena Centre for Bioinformatics, Jena, Germany; Theoretical Systems Biology, Institute of Food Research, Colney, Norwich, UK

By using OMICtools you acknowledge that you have read and accepted the terms of the end user license agreement.