dinumt

This software is designed to identify and genotype nuclear insertions of mitochondrial origin from whole genome sequence data. It consists of two programs: dinumt (di-nu-mite), which identifies sites of insertions in a single sample and gnomit (geno-mite), which genotypes those sites across multiple samples. There is an additional program named clusterNumtsVcf which will merge sites identified in multiple samples into a single merged file for genotyping.

dinumt specifications

Desktop

Information

Unique identifier	OMICS_06147
Name	dinumt
Software type	Package/Module
Interface	Command line interface
Restrictions to use	None
Operating system	Unix/Linux
Computer skills	Advanced
Stability	Stable
Maintained	Yes

Versioning

No version available

Publication for dinumt

The genomic landscape of polymorphic human nuclear mitochondrial insertions

2014 Nucleic Acids Res

PMCID: 4227756

PMID: 25348406

DOI: 10.1093/nar/gku1038

dinumt institution(s)

Department of Computational Medicine and Bioinformatics, University of Michigan, Ann Arbor, MI, USA; Department of Human Genetics, University of Michigan, Ann Arbor, MI, USA

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