direct_contact_prediction specifications


Unique identifier OMICS_22532
Name direct_contact_prediction
Software type Framework/Library
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
Computer skills Advanced
Stability Stable
Maintained Yes




No version available


  • person_outline Edward Marcotte
  • person_outline Kevin Drew
  • person_outline Christian Muller

Publication for direct_contact_prediction

direct_contact_prediction institution(s)
Center for Systems and Synthetic Biology, Department of Molecular Biosciences, University of Texas at Austin, Austin, TX, USA; Flatiron Institute, Center for Computational Biology, Simons Foundation, New York, NY, USA; New York University Center for Genomics and Systems Biology, New York University, New York, NY, USA
direct_contact_prediction funding source(s)
Supported by grants from the National Institutes of Health (F32 GM112495; DP1 GM106408, R01 GM076536, R01DK110520, R01 HD085901, R35 GM122480 to EMM), Army Research Office (W911NF-12-1-0390), Cancer Prevention and Research Institute of Texas the Simons Foundation (Flatiron Institute, Center for Computational Biology), and the Welch foundation (F-1515).

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