DCA specifications

Information


Unique identifier OMICS_13941
Name Direct-Coupling Analysis
Alternative name Direct Coupling Analysis
Interface Web user interface
Restrictions to use Academic or non-commercial use
Input data A protein multiple sequence alignments (MSA)
Input format FASTA
Output data A direct information file with all the possible residue-residue pairing in the MSA
Programming languages MATLAB
Computer skills Basic
Stability Stable
Maintained Yes

Documentation


DCA article

DCA institution(s)
Center for Theoretical Biological Physics, University of California at San Diego, La Jolla, CA, USA; Human Genetics Foundation, Turin, Italy; Institute for Scientific Interchange, Turin, Italy; Department of Systems Biology, Harvard Medical School, Boston, MA, USA; Memorial Sloan–Kettering Cancer Center, Computational Biology Center, New York, NY, USA; Center for Computational Studies and Dipartimento di Fisica, Politecnico di Torino, Turin, Italy; Center for Theoretical Biological Physics, Rice University, Houston, TX, USA; Laboratoire de Génomique des Microorganismes, Unité Mixte de Recherche 7238, Université Pierre et Marie Curie, Paris, France
DCA funding source(s)
This work was supported by a European Commission Grant 267915, the Center for Theoretical Biological Physics sponsored by the National Science Foundation (NSF Grant PHY-0822283), and by NSF Grant MCB-1051438.

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