DCA specifications

Unique identifier:
OMICS_13941
Interface:
Web user interface
Input data:
A protein multiple sequence alignments (MSA)
Output data:
A direct information file with all the possible residue-residue pairing in the MSA
Computer skills:
Basic
Maintained:
Yes
Name:
Direct-Coupling Analysis
Restrictions to use:
Academic or non-commercial use
Input format:
FASTA
Programming languages:
MATLAB
Stability:
Stable

DCA support

Documentation

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Publications

Institution(s)

Center for Theoretical Biological Physics, University of California at San Diego, La Jolla, CA, USA; Human Genetics Foundation, Turin, Italy; Institute for Scientific Interchange, Turin, Italy; Department of Systems Biology, Harvard Medical School, Boston, MA, USA; Memorial Sloan–Kettering Cancer Center, Computational Biology Center, New York, NY, USA; Center for Computational Studies and Dipartimento di Fisica, Politecnico di Torino, Turin, Italy; Center for Theoretical Biological Physics, Rice University, Houston, TX, USA; Laboratoire de Génomique des Microorganismes, Unité Mixte de Recherche 7238, Université Pierre et Marie Curie, Paris, France

Funding source(s)

This work was supported by a European Commission Grant 267915, the Center for Theoretical Biological Physics sponsored by the National Science Foundation (NSF Grant PHY-0822283), and by NSF Grant MCB-1051438.

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