D3E specifications

Unique identifier:
OMICS_08955
Software type:
Package/Module
Restrictions to use:
None
Operating system:
Unix/Linux
License:
GNU General Public License version 2.0
Stability:
Stable
Name:
Discrete Distributional Differential Expression
Interface:
Command line interface
Input data:
D3E takes a read-count table as an input, with rows and columns corresponding to transcripts and cells, respectively. The user should split the columns into two or more groups by providing cell labels in the input file. If there are more than two groups of cells, they must be compared one pair at a time.
Programming languages:
Python
Computer skills:
Advanced
Maintained:
Yes

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D3E distribution

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D3E specifications

Unique identifier:
OMICS_08955
Interface:
Web user interface
Input data:
D3E takes a read-count table as an input, with rows and columns corresponding to transcripts and cells, respectively. The user should split the columns into two or more groups by providing cell labels in the input file. If there are more than two groups of cells, they must be compared one pair at a time.
Computer skills:
Basic
Maintained:
Yes
Name:
Discrete Distributional Differential Expression
Restrictions to use:
None
Programming languages:
Python
Stability:
Stable

D3E support

Documentation

Maintainer

  • Martin Hemberg <>
  • Martin Hemberg <>

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Credits

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Publications

Institution(s)

Department of Plant Sciences, University of Cambridge, Downing Street, Cambridge, UK; Wellcome Trust Sanger Institute, Wellcome Genome Campus, Hinxton, UK

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