DiScRIBinATE protocols

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description
DiScRIBinATE computational protocol

DiScRIBinATE specifications

Information


Unique identifier OMICS_01453
Name DiScRIBinATE
Alternative name Distance Score Ratio for Improved Binning And Taxonomic Estimation
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages Perl
Computer skills Advanced
Stability No
Maintained No

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Publication for Distance Score Ratio for Improved Binning And Taxonomic Estimation

DiScRIBinATE IN pipeline

2016
PMCID: 5047465
PMID: 27695034
DOI: 10.1371/journal.pone.0163099

[…] to ensure that such biases were not present in the datasets in the current study, taxonomic classification of the contigs in each of the samples (in each dataset) were first obtained using discribinate [63]. the taxonomic profiles of each sample (in the different datasets) were then compared by pca using stamp [64]. it was observed that the samples from different datasets clustered […]

DiScRIBinATE institution(s)
Bio-Sciences Division, Innovation Labs, Tata Consultancy Services, Hyderabad, Andhra Pradesh, India

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