Disperse specifications

Unique identifier:
OMICS_24246
Interface:
Command line interface, Graphical user interface
Input data:
A file with gene names.
Output format:
TSV
Programming languages:
Java, Perl
Computer skills:
Advanced
Requirements:
FindBin, FileHandle, File::Spec, Getopt::Long, LWP::Simple, Log::Log4perl; Java libraries, ProbeMaker, PieceMaker, NCBI-BLAST
Software type:
Pipeline/Workflow
Restrictions to use:
None
Output data:
A number of files in the same directory as the input file.
Operating system:
Unix/Linux, Mac OS, Windows
License:
GNU General Public License version 3.0
Stability:
Stable
Maintained:
Yes

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Publications

Institution(s)

Department of Medicine, Division of Oncology, Stanford University School of Medicine, Clark Center, Stanford, CA, USA; Department of Genetics and Pathology, Rudbeck Laboratory, Uppsala University, Uppsala, Sweden; Stanford Genome Technology Center, Stanford University, Palo Alto, CA, USA

Funding source(s)

Supported by National Institue of Health (5K08CA96879–6, 2P01HG000205, 5R21CA128485); Reddere Foundation; Liu Bie Ju Cha and Family Fellowship in Cancer and Olle Engkvist Byggmästare Foundation.

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