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DISPLAR specifications


Unique identifier OMICS_08398
Interface Web user interface
Restrictions to use None
Input data Protein structures in PDB format
Computer skills Basic
Stability Stable
Maintained Yes


  • person_outline Huan-Xiang Zhou <>

Publication for DISPLAR

DISPLAR in publications

PMCID: 4683125
PMID: 26681179
DOI: 10.1371/journal.pcbi.1004639

[…] to show different aspects of the programs. the webservers assessed include bindn[], bindn+[], rnabindr[], rnabindrplus[], dbs-pred[], dbs-pssm[], kyg[], prbr[], pprint[], dnabindprot[], protedna[], displar[], dr_bind1[], aarna[], rbscore[], rbrdetector[], dnabind[], xypan[] and rnaprosite (lilab.ecust.edu.cn/nabind/), while the programs are predict_rbp[], prna[] and rbrident[]. previously […]

PMCID: 4666365
PMID: 26527718
DOI: 10.1093/nar/gkv1134

[…] be compared to the structural methods for model testing. thus we have also written network scripts to send the structural information of each testing dbd sequence to the dbd-hunter web-server and displar web-server with the default settings suggested. briefly, dbd-hunter is a structural template matching method using statistical potential () while displar is a neural network method taking […]

PMCID: 4480070
PMID: 25926325
DOI: 10.1093/aobpla/plv045

[…] clade a1). however, an equally distinct cluster (supporting information—fig. s2, clade c2) comprises all three individuals of diploid c. marshallii (series apiifoliae in section crataegus) plus c. displar, a tetraploid in series lacrimatae (section coccineae). another example is c. pinnatifida (section crataegus); its2 sequences were obtained for two of the individuals of this species [see […]

PMCID: 4394471
PMID: 25756377
DOI: 10.3390/ijms16035194

[…] meta-prediction [] and comparative study work [] is required. these methods are robust and effective in many applications, including dna-binding site prediction. for example, the prediction method displar was constructed using two-layer neural networks [], and seqprednet was constructed using a delicate three-layered network []. the metadbsite integrated six online web servers to predict […]

PMCID: 4290685
PMID: 25521807
DOI: 10.1186/1752-0509-8-S4-S10

[…] of a standardized benchmark for the evaluation. here, it is not our intent to make a systematic comparison between different methods. we only compared our method with two recent methods, mv [] and displar [], regarding their ability to find dna-binding sites on the 13 unbound proteins. both mv and displar use both structural and sequence information in predicting dna-binding sites., the mv […]

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DISPLAR institution(s)
Department of Physics and Institute of Molecular Biophysics and School of Computational Science, Florida State University, Tallahassee, FL, USA
DISPLAR funding source(s)
This work was supported in part by NIH grant GM58187.

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