DisVis statistics

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Citations per year

Number of citations per year for the bioinformatics software tool DisVis
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Tool usage distribution map

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Associated diseases

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Popular tool citations

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DisVis specifications

Information


Unique identifier OMICS_10292
Name DisVis
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages Python
Parallelization CUDA
License Apache License version 2.0
Computer skills Advanced
Stability Stable
Requirements
Numpy, C-compiler
Maintained Yes

Versioning


Version Operating System DOI Size Download Info
2.0
32/64 bits
10.5281/zenodo.1037197 4.56 Mo get_app

Documentation


Maintainers


Additional information


http://milou.science.uu.nl/cgi/services/DISVIS/disvis/help

Information


Unique identifier OMICS_10292
Name DisVis
Interface Web user interface
Restrictions to use None
Computer skills Basic
Stability Stable
Maintained Yes

Documentation


Maintainers


Additional information


http://milou.science.uu.nl/cgi/services/DISVIS/disvis/help

Publications for DisVis

DisVis citations

 (2)
library_books

TRiC controls transcription resumption after UV damage by regulating Cockayne syndrome protein A

2018
Nat Commun
PMCID: 5847541
PMID: 29531219
DOI: 10.1038/s41467-018-03484-6

[…] equence was used for modeling. All structural images were produced in UCSF Chimera, and cross-link distance analysis was performed using XlinkAnalyzer,. Accessible interaction space was modeled using DisVis and human CSA (PDB: 4A11). […]

library_books

The interactome of intact mitochondria by cross linking mass spectrometry provides evidence for coexisting respiratory supercomplexes*

2017
PMCID: 5795388
PMID: 29222160
DOI: 10.1074/mcp.RA117.000470

[…] d two CI-CIII links) clearly violate the cross-linker distance restraint (A and B). Based on the violating intercomplex cross-links, we mapped alternative interaction spaces of CIII and CIV using the DisVis software (). The resulting interaction spaces, so-called isosurfaces, summarize all center-of-mass localizations of CIII and CIV satisfying the cross-link distance restraints (D). Interestingly […]


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DisVis institution(s)
Bijvoet Center for Biomolecular Research, Faculty of Science–Chemistry, Utrecht University, Utrecht, The Netherlands; LIP-Laboratório de Instrumentação e Física Experimental de Particulãs, Avenida Lisbon, Portugal; Istituto Nazionale di Fisica Nucleare-Sezione di Padova, Padova, Italy; Magnetic Resonance Center and Department of Chemistry “Ugo Schiff”, University of Florence, Sesto, Fiorentino, Italy
DisVis funding source(s)
Supported by grants from the Netherlands Organization for Scientific Research (NWO; ECHO grant no. 711.011.009) and by European H2020 eInfrastructure grants (EGI-Engage, grant no. 654142; INDIGO-DataCloud, grant no. 653549; West-Life grant no. 675858; and BioExcel grant no. 675728).

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