DADA specifications

Information


Unique identifier OMICS_01117
Name Divisive Amplicon Denoising Algorithm
Alternative name DADA2
Software type Package/Module
Interface Command line interface
Restrictions to use None
Input data Amplicon sequencing data.
Input format FASTQ
Biological technology Illumina
Operating system Unix/Linux
Programming languages R
License GNU Lesser General Public License version 3.0
Computer skills Advanced
Version 1.5.2
First release date 2016
Stability Stable
Maintained Yes

Taxon


  • Eubacteria
    • Bacillus subtilis
    • Escherichia coli
    • Mycobacterium tuberculosis
    • Mycoplasma pneumoniae
    • Helicobacter pylori
    • Staphylococcus aureus

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Documentation


Maintainer


  • person_outline Benjamin Callahan <>

Additional information


Previous version: https://github.com/mjrosen/dadahttp://benjjneb.github.io/dada2/

DADA articles

DADA institution(s)
Department of Statistics, Stanford University, Stanford, CA, USA; Second Genome, South San Francisco, CA, USA; Department of Applied Physics, Stanford University, Stanford, CA, USA
DADA funding source(s)
Supported by the NSF (DMS-1162538), the NIH (R01AI112401) and the Samarth Foundation (Stanford Microbiome Seed Grant).

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