DNA structure analysis software tools and databases

DNA structure analysis steps

Most recent bioinformatics tools

SIDDBASE
Dataset

SIDDBASE

Provides stress-induced DNA duplex destabilization (SIDD) profiles of microbial…

Provides stress-induced DNA duplex destabilization (SIDD) profiles of microbial genomes. SIDDBASE is a database that gives users an overview of the SIDD sites in their selected genome, and their…

3D-NuS
Web

3D-NuS 3-Dimensional Nucleic acid Structures

Allows users to build three-dimensional structures. 3D-NuS builds 3D models of…

Allows users to build three-dimensional structures. 3D-NuS builds 3D models of right handed intra/intermolecular DNA/RNA duplexes and RNA-DNA hybrid duplexes, left handed Z-DNA/Z-RNA duplexes,…

DNA…
Web

DNA Sonification

Generates an auditory display from DNA sequence information. DNA Sonification…

Generates an auditory display from DNA sequence information. DNA Sonification allows to apply a sonification algorithm to the selected DNA sequence. Users can apply different sonification algorithms…

DNATCO
Web

DNATCO

Classifies local conformations of DNA molecules beyond their traditional…

Classifies local conformations of DNA molecules beyond their traditional sorting to A, B and Z DNA forms. DNATCO provides an interface to robust algorithms assigning conformation classes called ntC…

Most popular analytical software and databases

QmRLFS-finder
Desktop

QmRLFS-finder

Predicts R-loop Forming Sequences (RLFSs) in nucleic acid sequences based on…

Predicts R-loop Forming Sequences (RLFSs) in nucleic acid sequences based on experimentally supported structural models of RLFSs. This tool identifies and visualizes RLFS coordinates from any natural…

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