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DNase I hypersensitive-site detection software tools | Genome annotation

Regulatory DNA elements are associated with DNase I hypersensitive sites (DHSs). Accordingly, identification of DHSs will provide useful insights for in-depth investigation into the function of noncoding genomic regions. Source text: Liu et al.,…
iDHS-EL
Web

iDHS-EL

A predictor for identifying the location of DNase I hypersensitive sites (DHSs)…

A predictor for identifying the location of DNase I hypersensitive sites (DHSs) in human genome. iDHS-EL was formed by fusing three individual RF (Random Forest) classifiers into an ensemble…

DHC-MEGE
Desktop

DHC-MEGE DNase Hypersensitivity Connectivity Motif Enrichment in GeneExpression

A program for the identification of enriched motifs in gens found to be…

A program for the identification of enriched motifs in gens found to be differentially expressed in a microarray or RNA-seq experiment. DHC-MEGE is able to identify distal elements such as enhancers,…

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