DNase-seq data analysis software tools

DNase-seq data analysis software tools

Sequencing of DNase I hypersensitive sites (DNase-seq) is a powerful technique for identifying cis-regulatory elements across the genome. Many people currently analyzing DNase-seq data are using tools designed for ChIP-seq work, but may be inappropriate for DNase-seq data.

Data preprocessing

Data processing

Data analysis

Annotation

Data visualization

File manipulation

Unclassified tools