DO.db specifications

Information


Unique identifier OMICS_22607
Name DO.db
Restrictions to use None
Community driven No
Data access File download
User data submission Not allowed
Version 2.9
Requirements
AnnotationDbi, methods, R(>=2.7.0), AnnotationDbi(>=1.9.7)
Maintained Yes

Documentation


Maintainer


  • person_outline Jiang Li

Additional information


Allows users to ease the Disease Ontology (DO) consultation. DO.db is composed of annotation maps for representing the content of DO through Bimap object. The dataset is composed of an R package that aims to depict relationships between DO terms and their ancestors according to the directed acyclic graph (DAG) defined by the Disease Ontology Consortium.

DO.db citation

library_books

TCGA Workflow: Analyze cancer genomics and epigenomics data using Bioconductor packages

2016
F1000Res
PMCID: 5302158
PMID: 28232861
DOI: 10.5256/f1000research.9601.r14695

[…] eanplot _ 1.2 138 [131] codetools _ 0.2–14 mvtnorm _ 1.0–5 139 [133] tibble _ 1.1 gtools _ 3.5.0 140 [135] openssl _ 0.9.4 survival _ 2.39–5 141 [137] limma _ 3.28.17 munsell _ 0.4.3 142 [139] DO.db _ 2.9 GetoptLong _ 0.1.3 143 [141] sjmisc _ 1.8 haven _ 0.2.1 144 [143] reshape2 _ 1.4.1 gtable _ 0.2.0 […]

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