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DOGAN specifications


Unique identifier OMICS_21140
Restrictions to use None
Community driven No
Data access Browse
User data submission Not allowed
Maintained Yes

DOGAN citations


Deep learning meets ontologies: experiments to anchor the cardiovascular disease ontology in the biomedical literature

J Biomed Semantics
PMCID: 5896136
PMID: 29650041
DOI: 10.1186/s13326-018-0181-1

[…] ames annotated from PubMed titles and/or abstracts are mapped to UniProtKB entries. Other studies have also carried out normalisation whilst making no distinction between genes/proteins. For example, Dogan et al. [] annotated genes/proteins of interest and manually added their corresponding Entrez Gene identifiers. There are, however, studies that have a list of multiple types of biomedical entiti […]


High Incidence of Pathogenic Streptococcus agalactiae ST485 Strain in Pregnant/Puerperal Women and Isolation of Hyper Virulent Human CC67 Strain

Front Microbiol
PMCID: 5808242
PMID: 29467722
DOI: 10.3389/fmicb.2018.00050

[…] ., ). The results of eBURST analysis showed that ST17 was arisen from bovine ST67 (Bisharat et al., ). But most scholars believed that human and bovine S. agalactiae are largely distinct populations (Dogan et al., ; Duarte et al., ; Sukhnanand et al., ; Brochet et al., ; Sørensen et al., ). In this study, evolutionary analysis based on MLST and WGSs confirmed that the three isolates NNA006 (ST929) […]


Predictive and prognostic role of mean platelet volume in patients with first ever acute ischemic stroke

PMCID: 5726817
PMID: 28416783
DOI: 10.17712/nsj.2017.2.20160330

[…] uals. Greisenegger et al concluded that patients who had suffered an intense stroke attack already had an elevated MPV level, reflecting increased platelet reactivity just before the stroke occurred. Dogan et al reported enhanced MPV levels in patients with AIS and TIA. They claimed that MPV may provide diagnostic and prognostic information in such a condition. In a study conducted in an emergency […]


Genome sequence of Aspergillus luchuensis NBRC 4314

PMCID: 5144674
PMID: 27651094
DOI: 10.1093/dnares/dsw032

[…] DBJ/EMBL/GenBank under the accession nos BCWF01000001-BCWF01000044. Information about the sequences and gene annotations are also available in the genome database of microorganisms sequenced at NITE (DOGAN; […]


BioCreative V BioC track overview: collaborative biocurator assistant task for BioGRID

PMCID: 5009341
PMID: 27589962
DOI: 10.1093/database/baw121

[…] Team members: Rezarta Islamaj Doğan, Sun Kim, Andrew Chatr-Aryamontri, Donald C. Comeau and W. John Wilbur.Islamaj Doğan et al. () contributed four different runs for Task 7. This particular task was novel as there existed no prio […]


BCL11A enhancer dissection by Cas9 mediated in situ saturating mutagenesis

PMCID: 4644101
PMID: 26375006
DOI: 10.1038/nature15521

[…] Human erythroid H3K27ac ChIP-seq was obtained from Xu et al and mouse erythroid H3K27ac ChIP-seq was obtained from Kowalczyk et al and Dogan et al. We uniformly processed all the datasets using the same pipeline with the same criteria to call super-enhancers. Specifically, we started from raw reads and realigned each dataset with Bow […]


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