DOVIS statistics

info info

Citations per year

Number of citations per year for the bioinformatics software tool DOVIS
info

Tool usage distribution map

This map represents all the scientific publications referring to DOVIS per scientific context
info info

Associated diseases

This word cloud represents DOVIS usage per disease context
info

Popular tool citations

chevron_left Ligand-based virtual screening chevron_right
Want to access the full stats & trends on this tool?

Protocols

DOVIS specifications

Information


Unique identifier OMICS_20539
Name DOVIS
Alternative name DOcking-based VIrtual Screening
Software type Pipeline/Workflow
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages C++, Perl, Python
License GNU General Public License version 3.0
Computer skills Advanced
Version 2.0.1
Stability Stable
Maintained Yes

Download


download.png

Versioning


No version available

Maintainers


  • person_outline Jaques Reifman
  • person_outline Xiaohui Jiang
  • person_outline Kamal Kumar
  • person_outline Xin Hu
  • person_outline Anders Wallqvist

Publications for DOcking-based VIrtual Screening

DOVIS citations

 (27)
library_books

Brain Training in Children and Adolescents: Is It Scientifically Valid?

2018
Front Psychol
PMCID: 5946581
PMID: 29780336
DOI: 10.3389/fpsyg.2018.00565

[…] This online platform is designed to train EF and was endorsed by a randomized, double-blind, placebo-controlled trial on children with ADHD aged 8–12 years (Dovis et al., ). The experimental group received 25 sessions of 30–35 min each. After training, the trained group significantly improved in EF trained skills (NT). No FT on behavior or long-term effec […]

library_books

Working Memory and Reinforcement Schedule Jointly Determine Reinforcement Learning in Children: Potential Implications for Behavioral Parent Training

2018
Front Psychol
PMCID: 5882844
PMID: 29643822
DOI: 10.3389/fpsyg.2018.00394

[…] e of optimally learning through reinforcement and decrease the possible influence of working memory deficits. However, given that clinical samples are quite heterogeneous with regards to WM capacity (Dovis et al., ), assessment and tailoring of BPT toward individual WM performance may be essential. Also, as our study suggests that individual differences in WM capacity may be associated with the re […]

library_books

A high working memory load prior to memory retrieval reduces craving in non treatment seeking problem drinkers

2017
PMCID: 5847068
PMID: 29181814
DOI: 10.1007/s00213-017-4785-4

[…] he first 12 trials (nine chessboard trials and three rectangle trials) were excluded from analyses because participants typically need a certain number of trials to reach an optimal difficulty level (Dovis et al. ). The remaining 64 were divided into four blocks of 12 chessboard trials and 4 rectangle trials. For these four blocks, the mean length of the chessboard sequence was calculated, as well […]

library_books

Aptamer Bioinformatics

2017
Int J Mol Sci
PMCID: 5751119
PMID: 29186809
DOI: 10.3390/ijms18122516

[…] flexibility, were selected using the AMBER force field simulation and the generalized Born solvation model []. (3) Screening the RNA library with computational docking—a modified docking tool called DOVIS using Autodock v4 [] was used to simulate interactions between all the generated RNA three-dimensional structures and small molecule targets. Docking was scored based on their calculated affinit […]

call_split

Identification of Potent Chloride Intracellular Channel Protein 1 Inhibitors from Traditional Chinese Medicine through Structure Based Virtual Screening and Molecular Dynamics Analysis

2017
Biomed Res Int
PMCID: 5632872
PMID: 29147652
DOI: 10.1155/2017/4751780
call_split See protocol

[…] imulations were performed employing Lamarckian genetic algorithm, and the receptor was kept rigid, while the ligands were flexible to rotate and explore the most probable binding conformations. After docking-based virtual screening, the top 5000 TCM compounds with docking score were obtained [, ].The top 5,000 TCM compounds were resorted by X-Score. Again, the top 500 compounds were selected from […]

library_books

Time on task effects in children with and without ADHD: depletion of executive resources or depletion of motivation?

2017
PMCID: 5701950
PMID: 28536846
DOI: 10.1007/s00787-017-1006-y

[…] ent study was not strong enough. Although the gift was emotionally appealing, it was only worth 50 eurocents. Children with ADHD are assumed to have an elevated reward threshold [, ], and as shown by Dovis and colleagues [], only relatively large rewards (above threshold) motivated children with ADHD enough to improve their performance on EF tasks, whereas small rewards did not exert any influence […]


Want to access the full list of citations?
DOVIS institution(s)
Biotechnology HPC Software Applications Institute, Telemedicine and Advanced Technology Research Center, U.S. Army Medical Research and Materiel Command, Fort Detrick, MD, USA
DOVIS funding source(s)
Supported by the U.S. Department of Defense High Performance Computing Modernization Program, under the High Performance Computing Software Applications Institutes initiative.

DOVIS reviews

star_border star_border star_border star_border star_border
star star star star star

Be the first to review DOVIS