dprimer statistics

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dprimer specifications

Information


Unique identifier OMICS_02342
Name dprimer
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages C++
License GNU General Public License version 2.0
Computer skills Advanced
Stability Stable
Maintained Yes

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dprimer in publications

 (5)
PMCID: 4640864
PMID: 26555962
DOI: 10.1371/journal.pone.0142745

[…] to the l1 sequence of t1l/53 (accession: m24734), bprimer position refers to the s1 sequence of tll/53 (accession:m35963), cprimer position refers to the s1 sequence of t2j/55 (accession:m35964), dprimer position refers to the s1 sequence of byd1 (accession: dq312301.1), eprimer position refers to the s1 sequence of t3d/55 (accession:m10262), sequence alignment was performed by clustalw […]

PMCID: 5381505
PMID: 24872333
DOI: 10.1038/srep05100

[…] each treatment and number of animals within each of the pens are shown above., aprimer set used are from alali et al., bprimer set used are from cottell et al., cprimer set used are from ng et al., dprimer set used are from steinman et al., 1broad range primers to generate template for the standard curve., 2narrow range primers for sample quantification., *sequence used for primer […]

PMCID: 4009252
PMID: 24839341
DOI: 10.1155/2014/836082

[…] of interests regarding the publication of this paper., chr: chromosome; atarget gene; breference gene; cprimer sequences designed using primer3 software, version 0.4.0 (http://frodo.wi.mit.edu/); dprimer sequences derived from saugier-veber et al. []., r2: determination coefficient; atarget gene; breference gene., δkct: fold copy number change; n: sample size; sd: standard deviation., δkct […]

PMCID: 3236336
PMID: 21767389
DOI: 10.1186/bcr2917

[…] information about whether the pcr product includes an exon-exon boundary. bgeneid from entrezgene accessed 2 june 2010. cdistance from 3' end of the pcr product to 5' beginning of the poly(a) tail. dprimer set for fgfr2 is in a region of fgfr2 that is present in both fgfr2 iiib and fgfr2 iiic., isoforms fgfr2-iiib and fgfr2-iiic differ by the alternative splicing in of either exon 9 or exon 10 […]

PMCID: 3224097
PMID: 21682874
DOI: 10.1186/1471-2180-11-139

[…] according to their orientation in the schu s4 reference genome (nc_006570);, bassays designed from the reverse complement of the reference sequence., cd: derived; a: ancestral; c: common primer, dprimer tails and antepenultimate mismatch bases are in lower case, astrain id in the northern arizona university dna collection, bcity, town, or village, ccansnp lineage, dgenotypes (a to e) […]


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