DR_SEQAN specifications

Information


Unique identifier OMICS_25132
Name DR_SEQAN
Alternative name Drug Resistance SEQuence ANalyzer
Software type Application/Script
Interface Command line interface
Restrictions to use None
Operating system Windows
Computer skills Advanced
Stability Stable
Maintained Yes

Taxon


  • Viruses
    • Human immunodeficiency virus 1
    • Human immunodeficiency virus 2

Versioning


No version available

Maintainers


  • person_outline César Garriga
  • person_outline Luis Menéndez-Arias

Publication for Drug Resistance SEQuence ANalyzer

DR_SEQAN citation

library_books

HIV Drug Resistant Patient Information Management, Analysis, and Interpretation

2012
PMCID: 3626142
PMID: 23611761
DOI: 10.2196/resprot.1930

[…] resistance. These algorithms employ Boolean-based rules, some with penalties, and predict resistance by determining which mutations are present and/or absent.Two other domain-based algorithms are the Drug Resistance SEQuence ANalyzer (DR_SEQAN) and RetroGram. DR_SEQAN was coded by the Universidad Autónoma de Madrid for a Windows environment using Visual Basic. DR_SEQAN classifies three levels of r […]

DR_SEQAN institution(s)
Centro de Biología Molecular "Severo Ochoa", Consejo Superior de Investigaciones Científicas – Universidad Autónoma de Madrid, Madrid, Spain
DR_SEQAN funding source(s)
Supported by the Fundación para la Investigación y Prevención del SIDA en España (FIPSE), through grants 36200/01 and 36460/05.

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