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dreamBase

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Provides regulatory evidence of the transcription, RNA regulation and protein binding features of potentially expressed pseudogenes. dreamBase is a comprehensive and powerful platform to decode the transcription, expression, regulation, and modification of pseudogenes in multiple cancers and normal tissues. It was assembled with a large amount of data derived from ChIP-seq, DNase-seq, RNASeq and CLIP-seq experiments.

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dreamBase classification

dreamBase specifications

Software type:
Application/Script
Restrictions to use:
None
Stability:
Stable
Interface:
Web user interface
Computer skills:
Basic
Maintained:
Yes

dreamBase support

Maintainers

  • Jian-Hua Yang <>
  • Liang-Hu Qu <>
  • Ling-Ling Zheng <>

Credits

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Publications

Institution(s)

Key Laboratory of Gene Engineering of the Ministry of Education, State Key Laboratory for Biocontrol, Sun Yat-sen University, Guangzhou, China

Funding source(s)

Supported by National Key R&D Program of China [2017YFA0504400]; National Natural Science Foundation of China [31771459, 31770879, 31401975, 31370791, 91440110, 30900820, 31230042, 31471223]; Guangdong Province [S2012010010510, S2013010012457]; Science and Technology New Star in ZhuJiang Guangzhou city [2012J2200025]; Fundamental Research Funds for the Central Universities [2011330003161070, 14lgjc18, 16lgjc73]; China Postdoctoral Science Foundation [200902348]; Guangdong Province Key Laboratory of Computational Science and the Guangdong Province Computational Science Innovative Research Team.

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