DREME pipeline

DREME specifications

Information


Unique identifier OMICS_06294
Name DREME
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Computer skills Advanced
Stability Stable
Maintained Yes

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Maintainer


  • person_outline FIMO Team <>

Information


Unique identifier OMICS_06294
Name DREME
Interface Web user interface
Restrictions to use None
Computer skills Basic
Stability Stable
Maintained Yes

Maintainer


  • person_outline FIMO Team <>

Publication for DREME

DREME citation

2013
PMCID: 3912905

[…] as the percentage of pcr product from the average of the immunoprecipitated samples normalized to the average of the input samples., motif prediction was carried out using the online version of dreme (bailey, 2011) using 100 bp sequences around the summits of the best peak for each intergenic region for all samples. shuffled input sequences were used for background comparison. significant […]

DREME institution(s)
Institute for Molecular Bioscience, The University of Queensland, Brisbane, QLD, Australia

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