Differential RNA sequencing data analysis bioinformatics software tools

Differential RNA-seq (dRNA-seq) allows the transcriptome-wide mapping of bacterial transcriptional start sites (TSSs; Sharma et al., 2010).

Desktop app
G T A T C G C T A READemption READemption

READemption

A pipeline for the computational evaluation of RNA-Seq data.

A pipeline for the computational evaluation of RNA-Seq data.

Desktop app
G T A T C G C T A RNAseg RNAseg

RNAseg

A tool for the identification of transcriptional units based on dRNA-seq data.

A tool for the identification of transcriptional units based on dRNA-seq data.

Web app
G T A T C G C T A TSSAR TSSAR

TSSAR

A web service for predicting bacterial transcription start sites from dRNA-seq…

A web service for predicting bacterial transcription start sites from dRNA-seq data.

Desktop app
G T A T C G C T A TSSer TSSer

TSSer

A computational method that enables the automatic inference of TSSs from…

A computational method that enables the automatic inference of TSSs from dRNA-seq data.

Curators for dRNA-seq analysis

  • Rekin's Janky's avatar image
    Rekin's Janky
    Laboratory of Computational…
  • Bogdan Mirauta's avatar image
    Bogdan Mirauta
    Laboratory of Computational and…
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