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DRTF specifications


Unique identifier OMICS_00554
Alternative name Database of Rice Transcription Factors
Restrictions to use None
Maintained Yes


  • Plants and Fungi
    • Oryza sativa


  • person_outline DRTF Team

Publication for Database of Rice Transcription Factors

DRTF citations


Effects of total flavonoids from Drynariae Rhizoma prevent bone loss in vivo and in vitro

PMCID: 5440975
PMID: 28580395
DOI: 10.1016/j.bonr.2016.09.001

[…] MC3T3-E1 cells were treated with DRTF (12.5 μg/ml). After 24 h of incubation, cells were washed with PBS and lysed in RIPA lysis solution. The cell lysates were centrifuged at 10,000 RPM for 10 min at 4 °C. The supernatants were coll […]


Mulberry Transcription Factor MnDREB4A Confers Tolerance to Multiple Abiotic Stresses in Transgenic Tobacco

PLoS One
PMCID: 4687919
PMID: 26695076
DOI: 10.1371/journal.pone.0145619

[…] for Biotechnology Information (NCBI, http://www.ncbi.nlm.nih.gov/); the Arabidopsis information resource (TAIR, http://www.arabidopsis.org/); EnsemblPlants (http://plants.ensembl.org/index.html); the database of rice transcription factors (DRTF, http://drtf.cbi.pku.edu.cn/index.php) and the plant transcription factor database (Plant TFDB, http://planttfdb.cbi.pku.edu.cn/). The information about th […]


Genome wide characterization of developmental stage and tissue specific transcription factors in wheat

BMC Genomics
PMCID: 4344791
PMID: 25766308
DOI: 10.1186/s12864-015-1313-y

[…] d wheat [].In 2009, Romeuf et al. constructed the first publicly available wheat TF database, the Database of Wheat Transcription Factors (wDBTF), by BlastX alignment against rice TF sequences in the Database of Rice Transcription Factors (DRTF) []. wDBTF contains 7112 putative wheat TF sequences belonging to 84 subfamilies. In the database, expression data and tissue source information are provid […]


Overexpression of a NAC transcription factor delays leaf senescence and increases grain nitrogen concentration in wheat

PMCID: 4949518
PMID: 25545326
DOI: 10.1111/plb.12296
call_split See protocol

[…] Protein sequences of all known rice (Oryza sativa ssp. Japonica) NAC genes were downloaded from DRTF (Database of Rice Transcription Factors), while known wheat NAC genes and known senescence‐related NAC genes from other plant species were downloaded from the UniProtKB database. The NAC domain p […]


Three CCT domain containing genes were identified to regulate heading date by candidate gene based association mapping and transformation in rice

Sci Rep
PMCID: 4286927
PMID: 25563494
DOI: 10.1038/srep07663

[…] of the known GHD7 protein was used to search (using the tBLASTn and BLASTp programs) against the Rice Genome Annotation Project (http://rice.plantbiology.msu.edu/)/NCBI (http://www.ncbi.nlm.nih.gov)/DRTF (http://drtf.cbi.pku.edu.cn/index.php). A total of 41 CCT genes were identified and named sequentially according to their genome positions (). The unrooted phylogenetic tree of CCT family members […]


Silicon Era of Carbon Based Life: Application of Genomics and Bioinformatics in Crop Stress Research

Int J Mol Sci
PMCID: 3709742
PMID: 23759993
DOI: 10.3390/ijms140611444

[…] One example of applying the above strategy to identify stress-related genes is the analysis of AP2/EREBPs in the rice genome []. “AP2/EREBP” was used as the keyword in searching databases, including DRTF, MSU NCBI, and KOMBE. Any non-redundant sequences obtained were then used as query terms in the TBLAST and BLASTP searches of the MSU and NCBI databases. Four genes with an incomplete AP2 domain […]

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DRTF institution(s)
Center for Bioinformatics, National Laboratory of Protein Engineering and Plant Genetic Engineering, College of Life Sciences, Peking University Beijing, China

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