Predicting the best treatment strategy from genomic information is a core goal of precision medicine. Source text: Costello et al., 2014.

TANDEM
Desktop

TANDEM

Employs a two-stage analysis to improve the interpretability of prediction…

Employs a two-stage analysis to improve the interpretability of prediction models by preferentially using the data types upstream of gene expression. To this end, we first split the molecular data…

NCI60 proteome…
Data

NCI60 proteome resource

A web application that facilitates comprehensive proteome analysis of the…

A web application that facilitates comprehensive proteome analysis of the NCI-60 cell line panel.

kbmtl
Desktop

kbmtl Kernelized Bayesian Multitask Learning

Combines kernel-based non-linear dimensionality reduction and binary…

Combines kernel-based non-linear dimensionality reduction and binary classification (or regression). kbmtl main feature is the joint Bayesian formulation of projecting data points into a shared…

CancerDP
Web

CancerDP

A webserver developed for predicting priority and potency of an anticancer drug…

A webserver developed for predicting priority and potency of an anticancer drug against a cancer cell line using its genomic features, in order to throw light in the field of personalized medicine,…

DCB
Data

DCB Drug and Cell-line Browser

An online interactive HTML5 data visualization tool for interacting with three…

An online interactive HTML5 data visualization tool for interacting with three of the recently published datasets of cancer cell-lines/drug-viability studies.

HerceptinR
Data

HerceptinR

A database of assays performed to test sensitivity or resistance of Herceptin…

A database of assays performed to test sensitivity or resistance of Herceptin Antibodies towards breast cancer cell lines.

CCLE
Data

CCLE Cancer Cell Line Encyclopedia

Provides a compilation of gene expression, chromosomal copy number, and…

Provides a compilation of gene expression, chromosomal copy number, and massively parallel sequencing data from human cancer cell lines. The resulting collection encompasses 36 tumor types. The…

GDSC
Data

GDSC Genomics of Drug Sensitivity in Cancer

An academic research program to identify molecular features of cancers that…

An academic research program to identify molecular features of cancers that predict response to anti-cancer drugs.

DBGC
Data

DBGC Database of Human Gastric Cancer

A comprehensive database that integrates various human gastric cancer-related…

A comprehensive database that integrates various human gastric cancer-related data resources. DBGC collects and unifies Human gastric cancer-related transcriptomics projects, proteomics projects,…

Information

By using OMICtools you acknowledge that you have read and accepted the terms of the end user license agreement.