DSDBASE specifications

Information


Unique identifier OMICS_02425
Name DSDBASE
Restrictions to use None
Maintained Yes

Maintainer


  • person_outline Ramanathan Sowdhamini

Publication for DSDBASE

DSDBASE citations

 (2)
library_books

Contribution of Disulfide Bridges to the Thermostability of a Type A Feruloyl Esterase from Aspergillus usamii

2015
PLoS One
PMCID: 4429965
PMID: 25969986
DOI: 10.1371/journal.pone.0126864

[…] Modeling of Disulfide Bonds in Proteins (MODIP, http://caps.ncbs.res.in/dsdbase/modip.html) and Disulfide by Design (DbD, http://cptweb.cpt.wayne.edu/DbD2/) were used to detect amino acid pairs, in the 3D structure of AuFaeA, where the disulfide bridges were likely to for […]

library_books

Binding mode prediction of conformationally restricted anandamide analogs within the CB1 receptor

2008
PMCID: 2289822
PMID: 18302793
DOI: 10.1186/1750-2187-3-5

[…] ng the formation of an eight-membered ring through such a disulfide linkage, the homologous amino acid sequences to these residues whose structures were determined experimentally were identified from DSDBASE []. Among 20 cyclic peptides that showed >70% sequence homology, those structures were discarded that were from Cys-rich proteins or exhibited poor geometry to fit into the TM core. The remain […]

DSDBASE institution(s)
National Centre for Biological Sciences, UAS-GKVK Campus, Bangalore, India

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