Tool stats & trends
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|Alternative name||Diffusion Toolkit|
|Interface||Command line interface, Graphical user interface|
|Restrictions to use||None|
|Operating system||Unix/Linux, Mac OS, Windows|
No version available
- person_outline DTK Team
The effect of the total small vessel disease burden on the structural brain network
[…] Corrections for eddy current and head motions were performed by coregistering all DWIs to b0 using FMRIB’s Diffusion Toolbox. Diffusion Toolkit was also used to estimate the diffusion tensor using the linear least-squares fitting method. To construct the structural connections between the 90 brain regions, deterministic whol […]
Impaired Prefrontal Amygdala Pathway, Self Reported Emotion, and Erection in Psychogenic Erectile Dysfunction Patients With Normal Nocturnal Erection
[…] g, eddy current distortions and motion artifact were corrected. The main pipeline processing steps included diffusion tensor estimation, FA calculation and fiber tract reconstruction (Chen et al., ). Diffusion toolkit toolbox (http://www.trackvis.org) was implemented to reconstruct the fiber tracts. The whole-brain fiber tracking was performed based on the Fiber Assignment by Continuous Tracking ( […]
In Vivo Multimodal Magnetic Resonance Imaging Changes After N Methyl d Aspartate Triggered Spasms in Infant Rats
[…] application of diffusion gradient pulses, a 4-ms diffusion gradient duration (δ), a gradient amplitude (G) of 46.52 mT/m, and the Jones 30 gradient scheme.Postprocessing analysis was performed using Diffusion Toolkit software (http://trackvis.org/). The cingulate cortex of each rat was selected and the fractional anisotropy (FA) and mean diffusivity (MD) were calculated from the diffusion tensor […]
Disrupted Module Efficiency of Structural and Functional Brain Connectomes in Clinically Isolated Syndrome and Multiple Sclerosis
[…] Diffusion MRI tractography was performed to reconstruct the whole-brain fiber streamlines with Diffusion Toolkit. All the tracts in the dataset were computed by seeding each voxel with an FA greater than 0.2. The tractography was terminated if it turned an angle greater than 45 degrees or reach […]
Influence of region of interest designs on quantitative measurement of multimodal imaging of MR non enhancing gliomas
[…] with a 128×128 spatial resolution for a 260×260 mm field of view. A total of 50 sections were obtained, with a section thickness of 3 mm and no intersection gap. ADC and FA maps were processed using Diffusion Toolkit (Martinos Center for Biomedical Imaging, Massachusetts General Hospital, Charlestown, MA, USA; http://www.trackvis.org/dtk/). […]
Do blast induced skull flexures result in axonal deformation?
[…] s–using the multi-block meshing capability in ANSYS ICEM CFD. shows the high-quality hexahedral meshes belonging to the male and female T1-MRI data, respectively.Axonal tractography, developed using Diffusion Toolkit (www.trackvis.org/dtk) and TrackVis (www.trackvis.org), was converted into a finite element truss mesh. The resultant tractography, of male and female, has 9452 and 9771 axonal tract […]
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