DuctApe specifications

Information


Unique identifier OMICS_25743
Software type Toolkit/Suite
Restrictions to use None
Operating system Unix/Linux
Programming languages Python
Computer skills Advanced
Version 0.17.12
Stability Stable
Requirements biopython, numpy, scipy, matplotlib, scikits.learn, networkx, pyyaml, blast+
Maintained Yes

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Maintainer


  • person_outline Marco Galardini <>

Additional information


http://combogenomics.github.io/DuctApe/howto.html

DuctApe article

DuctApe institution(s)
Department of Biology, University of Florence, Florence, Italy; Interdisciplinary Research Institute USR3078, CNRS-Université Lille Nord de France, Villeneuve d'Ascq, France; Consiglio per la Ricerca e la sperimentazione in Agricoltura, Centro di Ricerca per lo studio delle Relazioni tra Pianta e Suolo (CRA-RPS), Rome, Italy; Consiglio per la Ricerca e la sperimentazione in Agricoltura, Centro di Ricerca per l’Agrobiologia e la Pedologia (CRA-ABP), Florence, Italy
DuctApe funding source(s)
Supported by the Italian Ministry of Research (PRIN 2008 research grant contract No. TCKNJL, “Il pangenoma di Sinorhizobium meliloti: L’uso della genomica per il miglioramento agronomico dell’erba medica”) and by the project MARKERINBIO (DM 8348, 5/27/2010).

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