DupliPHY specifications

Information


Unique identifier OMICS_09944
Name DupliPHY
Interface Web user interface
Restrictions to use None
Computer skills Basic
Stability Stable
Maintained Yes

Maintainer


  • person_outline Ryan M. Ames

Publications for DupliPHY

DupliPHY citation

library_books

Inferring Gene Family Histories in Yeast Identifies Lineage Specific Expansions

2014
PLoS One
PMCID: 4055711
PMID: 24921666
DOI: 10.1371/journal.pone.0099480

[…] ated by WGD may be lost in both daughter species; in this case neither the duplication nor loss would be present in our input data. Second, a gene duplicated by WGD may be retained in both daughters. DupliPHY should assign this duplication to the WGD branch, leading to a large number of gains, and so long branch length in . Third, a duplicated gene may be differentially lost in one daughter specie […]

DupliPHY institution(s)
Faculty of Life Sciences, University of Manchester, Oxford Road, Manchester, UK
DupliPHY funding source(s)
Biotechnology and Biological Sciences Research Council, UK

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