DupMasker specifications


Unique identifier OMICS_25373
Software type Application/Script
Interface Command line interface
Restrictions to use None
Input data A DNA sequence.
Input format FASTA
Output data Some information of all seed alignments and information of all chained duplicons with ancestral state information.
Output format TXT
Operating system Unix/Linux
License Open Source License v2.1
Computer skills Advanced
Stability Stable
Maintained Yes


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  • person_outline Evan Eichler <>

Additional information

Users need to install the DupMasker database and its parent tool, RepeatMasker.

DupMasker articles

DupMasker institution(s)
Department of Genome Sciences, University of Washington School of Medicine, Seattle, WA, USA; Institute for Systems Biology, Seattle, WA, USA; Howard Hughes Medical Institute, Seattle, WA, USA
DupMasker funding source(s)
Supported by an NIH grant GM058815 and a Rosetta Inpharmatics fellowship (Merck Laboratories).

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