DANPOS specifications

Unique identifier:
OMICS_00502
Software type:
Pipeline/Workflow
Restrictions to use:
None
Programming languages:
Python, R
Computer skills:
Advanced
Stability:
Stable
Maintained:
Yes
Name:
Dynamic Analysis of Nucleosome and Protein Occupancy by Sequencing
Interface:
Command line interface
Operating system:
Unix/Linux
License:
GNU General Public License version 2.0
Version:
2.2.2
Requirements:
Req: rpy, numpy, Samtools

versioning

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No versioning.

DANPOS distribution

download

DANPOS support

Documentation

Maintainer

  • Wei Li <>

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Credits

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Publications

Institution(s)

Division of Biostatistics, Dan L. Duncan Cancer Center and Department of Molecular and Cellular Biology, Baylor College of Medicine, Houston, TX, USA; Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX, USA; Verna and Marrs McLean Department of Biochemistry and Molecular Biology, Baylor College of Medicine, Houston, TX, USA; Department of Genetics and Institute of Diabetes, Obesity, and Metabolism, School of Medicine, University of Pennsylvania, Philadelphia, PA, USA; Center for Cancer Epigenetics, The University of Texas M.D. Anderson Cancer Center, Houston, TX, USA; Department of Biochemistry and Molecular Biology, The University of Texas M.D. Anderson Cancer Center, Houston, TX, USA; Department of Molecular Carcinogenesis, Science Park, The University of Texas M.D. Anderson Cancer Center, Houston, TX, USA

Funding source(s)

Supported in part by Cancer Prevention and Research Institute of Texas grant RP110471-C3, DOD grant PC094421, and 973 project 2010CB944900 of China and NIH grant HG004840.

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Easy to download and run. Minimal dependencies.

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