DynaMiteC specifications

Information


Unique identifier OMICS_23551
Name DynaMiteC
Alternative name Dynamic Modeling and Clustering
Software type Application/Script
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Computer skills Advanced
Stability Stable
Maintained Yes

Taxon


  • Rodents
    • Mus musculus

Download


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Versioning


No version available

Maintainer


  • person_outline Nir Friedman

Publication for Dynamic Modeling and Clustering

DynaMiteC citation

library_books

A survey of computational tools for downstream analysis of proteomic and other omic datasets

2015
Hum Genomics
PMCID: 4624643
PMID: 26510531
DOI: 10.1186/s40246-015-0050-2

[…] ime courses along with the graphical query. In JAVA, PESTS [] and OPTricluster [] both of which are stand-alone with a GUI interface are useful for the clustering of short time-series data in MATLAB. DynamiteC is a dynamic modeling and clustering algorithm which interleaves clustering time-course gene expression data with estimation of dynamic models of their response by biologically meaningful pa […]

DynaMiteC institution(s)
School of Computer Science and Engineering, The Hebrew University of Jerusalem, Jerusalem, Israel; Department of Microbiology and Molecular Genetics, Faculty of Medicine, The Hebrew University of Jerusalem, Jerusalem, Israel; The Alexander Silberman Institute of Life Sciences, The Hebrew University of Jerusalem, Jerusalem, Israel
DynaMiteC funding source(s)
Supported, in part, by MODEL-IN FP7 Consortium; Maydan fellowship.

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