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Dynamix specifications


Unique identifier OMICS_19290
Name Dynamix
Software type Package/Module
Interface Graphical user interface
Restrictions to use None
Operating system Unix/Linux, Mac OS
Programming languages Javascript
License MIT License
Computer skills Medium
Version 1.2
Stability Stable
Source code URL https://git.embl.de/monfort/dynamix/tree/master
Registration required No
Maintained Yes




No version available


  • person_outline Matthias Monfort
  • person_outline Charles Girardot

Publication for Dynamix

Dynamix citations


Amelioration of CCl4 induced liver injury in swiss albino mice by antioxidant rich leaf extract of Croton bonplandianus Baill.

PLoS One
PMCID: 5927454
PMID: 29709010
DOI: 10.1371/journal.pone.0196411

[…] were separated and washed thrice with distilled water to remove dirt and dried at 50°C for two hours to eliminate moisture. Dried leaves were then milled with a grinder (Maharani, India, Model–Sujata Dynamix). A fine powdered leaf was stored in a refrigerator at −20°C. One hundred gm of the dried powder was stirred in 1 L of 70% methanol for 10 hours. The mixture was refluxed for 2 hours in soxhle […]


Complete Genome Sequence of Cluster J Mycobacteriophage Superphikiman

Genome Announc
PMCID: 5794948
PMID: 29437101
DOI: 10.1128/genomeA.01538-17

[…] the nucleotide sequences vary across this region (Phamerator.org). The immunity repressor in Superphikiman (gp191) is identical to the immunity repressor genes found in the cluster A1 bacteriophages Dynamix (gp75) (GenBank accession number AMD43071) and Abrogate (gp72) (GenBank accession number YP_009209461). The genome also contains the WhiB gene (gp126), which is shared by other cluster J bacte […]


“The care is the best you can give at the time”: Health care professionals’ experiences in providing gender affirming care in South Africa

PLoS One
PMCID: 5507544
PMID: 28704458
DOI: 10.1371/journal.pone.0181132

[…] nformation Programme in British Columbia [] (HC011); the Psychological Society of South Africa [] (HC009); WHO [] (HC001-005, HC007-009, HC011-012); APA [] (HC001, HC003, HC004, HC007, HC009); Gender DynamiX [, , ] (HC006, HC009); and various academic journal articles (HC009, HC001).With the exception of a position statement by the Psychological Society of South Africa [] and guidelines by the com […]


Dynamix: dynamic visualization by automatic selection of informative tracks from hundreds of genomic datasets

PMCID: 5870560
PMID: 28334301
DOI: 10.1093/bioinformatics/btx141

[…] A key concept behind Dynamix is to anticipate users’ actions and execute them automatically. Practically, for a given genomic window Dynamix removes tracks without features or containing only background level signal (locu […]


Radical Scavenging Activities of Lagerstroemia speciosa (L.) Pers. Petal Extracts and its hepato protection in CCl4 intoxicated mice

BMC Complement Altern Med
PMCID: 5241977
PMID: 28100224
DOI: 10.1186/s12906-016-1495-0

[…] distilled water to remove dust. The washed petals were sun dried and treated at 50 °C for two hours to eliminate moisture. Dried petals were then milled with a grinder (Maharani, India, Model –Sujata Dynamix). The fine powdered petal was stored in a refrigerator at −20 °C. One hundred gm of the dried powder was stirred in 1 L of 80% ethanol for 1 hour. The mixture was refluxed for 2 hours in soxhl […]


Determination of total cadmium, lead, arsenic, mercury and inorganic arsenic in mushrooms: outcome of IMEP 116 and IMEP 39

PMCID: 4299854
PMID: 25365736
DOI: 10.1080/19440049.2014.966336

[…] amination of the test material. After milling, this material was sieved over a 250 µm stainless steel sieve resulting in 522 g available for final mixing and homogenisation. Mixing was performed in a Dynamix CM-200 (WAB, Basel, Switzerland). Karl Fischer titration and laser diffraction analyses indicate that the material had a water content of 4% (m/m) with a top particle size below 200 µm, respec […]


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Dynamix institution(s)
European Molecular Biology Laboratory, Genome Biology Unit, Heidelberg, Germany

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